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Blast-list
Choose program to use and database to search:
Program
blastn
blastp
blastx
tblastn
tblastx
Database
nt
YBT_020_nt
YBT_1520_nt
YBT_1518_nt
Bsn5_nt
CT_43_nt
nr
csaB_593
B.t_kurstaki
BC_genome
BC_WGS
Bt_toxin0310
Enter here your input data as
Sequence in FASTA format
Accession or GI
Or load it from disk
Please read about
FASTA
format description
Set subsequence: From  
    To
The query sequence is
filtered
for low complexity regions by default.
Filter
Low complexity
Mask for lookup table only
E-value
0.0001
0.01
1
10
100
1000
Matrix
PAM30
PAM70
BLOSUM80
BLOSUM62
BLOSUM45
Perform ungapped alignment
Query Genetic Codes (blastx only)
Standard (1)
Vertebrate Mitochondrial (2)
Yeast Mitochondrial (3)
Mold Mitochondrial; ... (4)
Invertebrate Mitochondrial (5)
Ciliate Nuclear; ... (6)
Echinoderm Mitochondrial (9)
Euplotid Nuclear (10)
Bacterial (11)
Alternative Yeast Nuclear (12)
Ascidian Mitochondrial (13)
Flatworm Mitochondrial (14)
Blepharisma Macronuclear (15)
Database Genetic Codes (tblast[nx] only)
Standard (1)
Vertebrate Mitochondrial (2)
Yeast Mitochondrial (3)
Mold Mitochondrial; ... (4)
Invertebrate Mitochondrial (5)
Ciliate Nuclear; ... (6)
Echinoderm Mitochondrial (9)
Euplotid Nuclear (10)
Bacterial (11)
Alternative Yeast Nuclear (12)
Ascidian Mitochondrial (13)
Flatworm Mitochondrial (14)
Blepharisma Macronuclear (15)
Frame shift penalty
for blastx
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
25
30
50
1000
No OOF
Limit search to results of
Entrez query
Other advanced options:
Show
Tax Blast reports
NCBI-gi
Graphical Overview
Alignment view
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
BLAST XML
Hit Table
Descriptions
0
10
50
100
250
500
Alignments
0
10
50
100
250
500
Color schema
No color schema
Color schema 1
Color schema 2
Color schema 3
Color schema 4
Color schema 5
Color schema 6
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Email:
liaochenlanruo@webmail.hzau.edu.cn
      
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