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Choose
database
to use with PSI/PHI Blast:
nt
YBT_020_nt
YBT_1520_nt
YBT_1518_nt
Bsn5_nt
B.t_kurstaki
nr
Enter here your input data as
Sequence in FASTA format
Accession or GI
Or load it from disk
Please read about
FASTA
format description
Filter
Low complexity
Mask for lookup table only
Composition-based statistics
Compute Smith-Waterman alignments
Expect value for inclusion in PSI-BLAST iteration 1
Pattern for use in PHI-BLAST search
E-value
0.0001
0.01
1
10
100
1000
Matrix
PAM30
PAM70
BLOSUM80
BLOSUM62
BLOSUM45
Other advanced options:
NCBI-gi
Graphical Overview
Alignment view
Pairwise
query-anchored with identities
query-anchored without identities
flat query-anchored with identities
flat query-anchored without identities
BLAST XML
Hit Table
Descriptions
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Alignments
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Color schema
No color schema
Color schema 1
Color schema 2
Color schema 3
Color schema 4
Color schema 5
Color schema 6
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